Difference between revisions of "TSS:Hg 101687.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PARIS1= | |PARIS1= | ||
|TBC1D2A= | |TBC1D2A= | ||
| + | |all_trans=ENST00000636575.1:-39 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=-39 |
| − | |distance_to_tss=- | + | |distance_to_tss=-47638 |
|end=98303295 | |end=98303295 | ||
|end_of_center_position=98303288 | |end_of_center_position=98303288 | ||
|entrez_id=55357 | |entrez_id=55357 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=PARIS-1 | + | |gene_alias=PARIS-1{{!}}PARIS1{{!}}TBC1D2A |
|gene_description=TBC1 domain family member 2 | |gene_description=TBC1 domain family member 2 | ||
| − | |gene_name= | + | |gene_id=9568 |
| + | |gene_name=gamma-aminobutyric acid type B receptor subunit 2 | ||
| + | |gene_source=HGNC:4507 | ||
| + | |gene_symbol=GABBR2 | ||
| + | |gene_synonyms=GABABR2 GPRC3B HG20 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4507 | ||
|nearest_ensembl=ENSG00000095383 | |nearest_ensembl=ENSG00000095383 | ||
|nearest_promoter_id=NM_018421 | |nearest_promoter_id=NM_018421 | ||
|nearest_refseq=NM_018421 | |nearest_refseq=NM_018421 | ||
|nearest_unigene=Hs.371016 | |nearest_unigene=Hs.371016 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=98303279 | |start=98303279 | ||
|start_of_center_position=98303287 | |start_of_center_position=98303287 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000636575.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101687.1 | |tss_id=hg_101687.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98303287 |
|---|---|
| End of the center position in the TSS region: | 98303288 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000636575.1 |
|---|---|
| Distance: | -39 |
| Num_trans: | 1 |
| All_trans: | ENST00000636575.1:-39 |
TATA-Box annotation
| Distance to TSS: | -47638 |
|---|---|
| Nearest PromoterID: | NM_018421 |
| Entrez ID: | 55357 |
| Nearest Unigene: | Hs.371016 |
| Nearest Refseq: | NM_018421 |
| Nearest Ensembl: | ENSG00000095383 |
| Gene Name: | gamma-aminobutyric acid type B receptor subunit 2 |
| Gene Alias: | PARIS-1|PARIS1|TBC1D2A |
| Gene Description: | TBC1 domain family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
