Difference between revisions of "TSS:Hg 101695.1"
From referenceTSS
| Line 4: | Line 4: | ||
|HG20= | |HG20= | ||
|HRIHFB2099= | |HRIHFB2099= | ||
| − | |all_trans=AF069755:100 AF095784:182 | + | |all_trans=ENST00000259455.4:58 NM_005458:58 AF069755:100 AF095784:182 AF056085:-187 BC035071:-244 AB384741:255 AF099033:256 AF074483:256 AJ012188:256 JQ308173:256 KJ901996:429 CU690042:429 DQ891731:438 DQ894908:438 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance= | + | |distance=58 |
| − | |distance_to_tss= | + | |distance_to_tss=-66 |
|end=98709010 | |end=98709010 | ||
|end_of_center_position=98709002 | |end_of_center_position=98709002 | ||
|entrez_id=9568 | |entrez_id=9568 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=GABABR2 | + | |gene_alias=EIEE59{{!}}GABABR2{{!}}GPR51{{!}}GPRC3B{{!}}HG20{{!}}HRIHFB2099{{!}}NDPLHS |
|gene_description=gamma-aminobutyric acid type B receptor subunit 2 | |gene_description=gamma-aminobutyric acid type B receptor subunit 2 | ||
|gene_id=9568 | |gene_id=9568 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_005458 | |nearest_refseq=NM_005458 | ||
|nearest_unigene=Hs.198612 | |nearest_unigene=Hs.198612 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=98708992 | |start=98708992 | ||
|start_of_center_position=98709001 | |start_of_center_position=98709001 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000259455.4 NM_005458 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101695.1 | |tss_id=hg_101695.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=H9NIL8 O75899 |
}} | }} | ||
Revision as of 16:46, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 98709001 |
|---|---|
| End of the center position in the TSS region: | 98709002 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000259455.4 NM_005458 |
|---|---|
| Distance: | 58 |
| Num_trans: | 15 |
| All_trans: | ENST00000259455.4:58 NM_005458:58 AF069755:100 AF095784:182 AF056085:-187 BC035071:-244 AB384741:255 AF099033:256 AF074483:256 AJ012188:256 JQ308173:256 KJ901996:429 CU690042:429 DQ891731:438 DQ894908:438 |
TATA-Box annotation
| Distance to TSS: | -66 |
|---|---|
| Nearest PromoterID: | NM_005458 |
| Entrez ID: | 9568 |
| Nearest Unigene: | Hs.198612 |
| Nearest Refseq: | NM_005458 |
| Nearest Ensembl: | ENSG00000136928 |
| Gene Name: | gamma-aminobutyric acid type B receptor subunit 2 |
| Gene Alias: | EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS |
| Gene Description: | gamma-aminobutyric acid type B receptor subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
