Difference between revisions of "TSS:Hg 101700.1"
From referenceTSS
| Line 4: | Line 4: | ||
|HG20= | |HG20= | ||
|HRIHFB2099= | |HRIHFB2099= | ||
| − | |all_trans= | + | |all_trans=AF056085:-40 BC035071:-97 ENST00000259455.4:214 NM_005458:214 AF069755:256 AF095784:338 AB384741:411 AF099033:412 AF074483:412 AJ012188:412 JQ308173:412 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=-40 | |distance=-40 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-218 |
|end=98709157 | |end=98709157 | ||
|end_of_center_position=98709153 | |end_of_center_position=98709153 | ||
|entrez_id=9568 | |entrez_id=9568 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=GABABR2 | + | |gene_alias=EIEE59{{!}}GABABR2{{!}}GPR51{{!}}GPRC3B{{!}}HG20{{!}}HRIHFB2099{{!}}NDPLHS |
|gene_description=gamma-aminobutyric acid type B receptor subunit 2 | |gene_description=gamma-aminobutyric acid type B receptor subunit 2 | ||
|gene_id=9568 | |gene_id=9568 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_005458 | |nearest_refseq=NM_005458 | ||
|nearest_unigene=Hs.198612 | |nearest_unigene=Hs.198612 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=98709148 | |start=98709148 | ||
|start_of_center_position=98709152 | |start_of_center_position=98709152 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AF056085 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101700.1 | |tss_id=hg_101700.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98709152 |
|---|---|
| End of the center position in the TSS region: | 98709153 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF056085 |
|---|---|
| Distance: | -40 |
| Num_trans: | 11 |
| All_trans: | AF056085:-40 BC035071:-97 ENST00000259455.4:214 NM_005458:214 AF069755:256 AF095784:338 AB384741:411 AF099033:412 AF074483:412 AJ012188:412 JQ308173:412 |
TATA-Box annotation
| Distance to TSS: | -218 |
|---|---|
| Nearest PromoterID: | NM_005458 |
| Entrez ID: | 9568 |
| Nearest Unigene: | Hs.198612 |
| Nearest Refseq: | NM_005458 |
| Nearest Ensembl: | ENSG00000136928 |
| Gene Name: | gamma-aminobutyric acid type B receptor subunit 2 |
| Gene Alias: | EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS |
| Gene Description: | gamma-aminobutyric acid type B receptor subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
