Difference between revisions of "TSS:Hg 101732.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000374902.9:30 NM_017746:30 AK298916:76 AB060968:79 AK303662:79 AK000294:80 AK304869:89 BC030652:159 ENST00000535814.5:401 NM_001161584:401 AK302619:401 |
|bA208F1.2= | |bA208F1.2= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=30 |
| − | |distance_to_tss= | + | |distance_to_tss=-35 |
|end=100352982 | |end=100352982 | ||
|end_of_center_position=100352977 | |end_of_center_position=100352977 | ||
|entrez_id=54881 | |entrez_id=54881 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=Ipi1 | + | |gene_alias=Ipi1{{!}}bA208F1.2 |
|gene_description=testis expressed 10 | |gene_description=testis expressed 10 | ||
|gene_id=54881 | |gene_id=54881 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_017746 | |nearest_refseq=NM_017746 | ||
|nearest_unigene=Hs.494648 | |nearest_unigene=Hs.494648 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=100352971 | |start=100352971 | ||
|start_of_center_position=100352976 | |start_of_center_position=100352976 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_017746 | + | |transcript_name=ENST00000374902.9 NM_017746 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101732.1 | |tss_id=hg_101732.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9NXF1 | + | |uniprot_id=A0A024R169 Q9NXF1 |
}} | }} | ||
Revision as of 16:47, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 100352976 |
|---|---|
| End of the center position in the TSS region: | 100352977 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374902.9 NM_017746 |
|---|---|
| Distance: | 30 |
| Num_trans: | 11 |
| All_trans: | ENST00000374902.9:30 NM_017746:30 AK298916:76 AB060968:79 AK303662:79 AK000294:80 AK304869:89 BC030652:159 ENST00000535814.5:401 NM_001161584:401 AK302619:401 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_017746 |
| Entrez ID: | 54881 |
| Nearest Unigene: | Hs.494648 |
| Nearest Refseq: | NM_017746 |
| Nearest Ensembl: | ENSG00000136891 |
| Gene Name: | testis expressed 10 |
| Gene Alias: | Ipi1|bA208F1.2 |
| Gene Description: | testis expressed 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
