Difference between revisions of "TSS:Hg 101766.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC030595:0 ENST00000636434.1:-16 AK310471:-16 ENST00000374806.2:27 NM_147180:27 AF400667:27 AK057524:36 AK302547:36 BC066299:57 JF432717:66 KJ891875:66 AF085237:75 AF145026:75 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-31 |
|end=101595005 | |end=101595005 | ||
|end_of_center_position=101595001 | |end_of_center_position=101595001 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
|gene_alias=PPP3RL | |gene_alias=PPP3RL | ||
| − | |gene_description= | + | |gene_description=protein phosphatase 3 regulatory subunit B, beta |
|gene_id=5535 | |gene_id=5535 | ||
| − | |gene_name= | + | |gene_name=protein phosphatase 3 regulatory subunit B, beta |
|gene_source=HGNC:9318 | |gene_source=HGNC:9318 | ||
|gene_symbol=PPP3R2 | |gene_symbol=PPP3R2 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=101595000 | |start_of_center_position=101595000 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC030595 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101766.1 | |tss_id=hg_101766.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:47, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101595000 |
|---|---|
| End of the center position in the TSS region: | 101595001 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC030595 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | BC030595:0 ENST00000636434.1:-16 AK310471:-16 ENST00000374806.2:27 NM_147180:27 AF400667:27 AK057524:36 AK302547:36 BC066299:57 JF432717:66 KJ891875:66 AF085237:75 AF145026:75 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NM_147180 |
| Entrez ID: | 5535 |
| Nearest Unigene: | Hs.151167 |
| Nearest Refseq: | NM_147180 |
| Nearest Ensembl: | ENSG00000188386 |
| Gene Name: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Alias: | PPP3RL |
| Gene Description: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
