Difference between revisions of "TSS:Hg 101868.1"
From referenceTSS
| Line 5: | Line 5: | ||
|IKI3= | |IKI3= | ||
|TOT1= | |TOT1= | ||
| − | |all_trans=AK225798:-28 AB210033:-35 AF044195:-51 | + | |all_trans=AK225798:-28 AB210033:-35 ENST00000675748.1:-37 AF044195:-51 ENST00000675078.1:-54 ENST00000676044.1:-54 ENST00000675979.1:-54 ENST00000675325.1:-54 ENST00000495759.6:-54 ENST00000675893.1:-54 ENST00000675943.1:-54 ENST00000675535.1:-54 ENST00000674890.1:-54 ENST00000675233.1:-54 ENST00000676086.1:-54 ENST00000674836.1:-54 ENST00000675406.1:-54 ENST00000676237.1:-54 ENST00000675825.1:-54 ENST00000676424.1:-54 ENST00000675647.1:-54 ENST00000675877.1:-54 ENST00000675052.1:-54 ENST00000674535.1:-54 ENST00000675566.1:-54 ENST00000675507.1:-54 ENST00000675727.1:-54 ENST00000675215.1:-56 ENST00000675602.1:-57 AK001641:-57 AF153419:-59 ENST00000675765.1:-63 ENST00000674938.1:-63 ENST00000374647.10:-65 ENST00000676429.1:-65 ENST00000674704.1:-65 NM_003640:-65 NM_001330749:-65 NM_001318360:-65 AK289962:-65 AK304742:75 ENST00000675400.1:-76 ENST00000675938.1:-85 ENST00000676121.1:-86 LF206472:-91 MA442049:-91 ENST00000537196.1:96 CR749385:96 ENST00000676416.1:106 BC033094:155 ENST00000674948.1:-269 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=-28 | |distance=-28 | ||
| − | |distance_to_tss= | + | |distance_to_tss=70 |
|end=108934059 | |end=108934059 | ||
|end_of_center_position=108934054 | |end_of_center_position=108934054 | ||
|entrez_id=8518 | |entrez_id=8518 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=DYS | + | |gene_alias=DYS{{!}}FD{{!}}IKAP{{!}}IKBKAP{{!}}IKI3{{!}}TOT1 |
| − | |gene_description= | + | |gene_description=elongator complex protein 1 |
|gene_id=8518 | |gene_id=8518 | ||
| − | |gene_name= | + | |gene_name=elongator acetyltransferase complex subunit 1 |
|gene_source=HGNC:5959 | |gene_source=HGNC:5959 | ||
| − | |gene_symbol= | + | |gene_symbol=ELP1 |
| − | |gene_synonyms= | + | |gene_synonyms=IKAP IKI3 TOT1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5959 | |hgnc_mgi_id=HGNC:5959 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_003640 | |nearest_refseq=NM_003640 | ||
|nearest_unigene=Hs.494738 | |nearest_unigene=Hs.494738 | ||
| − | |num_trans= | + | |num_trans=51 |
|species=human | |species=human | ||
|start=108934048 | |start=108934048 | ||
Revision as of 16:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 108934053 |
|---|---|
| End of the center position in the TSS region: | 108934054 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK225798 |
|---|---|
| Distance: | -28 |
| Num_trans: | 51 |
| All_trans: | AK225798:-28 AB210033:-35 ENST00000675748.1:-37 AF044195:-51 ENST00000675078.1:-54 ENST00000676044.1:-54 ENST00000675979.1:-54 ENST00000675325.1:-54 ENST00000495759.6:-54 ENST00000675893.1:-54 ENST00000675943.1:-54 ENST00000675535.1:-54 ENST00000674890.1:-54 ENST00000675233.1:-54 ENST00000676086.1:-54 ENST00000674836.1:-54 ENST00000675406.1:-54 ENST00000676237.1:-54 ENST00000675825.1:-54 ENST00000676424.1:-54 ENST00000675647.1:-54 ENST00000675877.1:-54 ENST00000675052.1:-54 ENST00000674535.1:-54 ENST00000675566.1:-54 ENST00000675507.1:-54 ENST00000675727.1:-54 ENST00000675215.1:-56 ENST00000675602.1:-57 AK001641:-57 AF153419:-59 ENST00000675765.1:-63 ENST00000674938.1:-63 ENST00000374647.10:-65 ENST00000676429.1:-65 ENST00000674704.1:-65 NM_003640:-65 NM_001330749:-65 NM_001318360:-65 AK289962:-65 AK304742:75 ENST00000675400.1:-76 ENST00000675938.1:-85 ENST00000676121.1:-86 LF206472:-91 MA442049:-91 ENST00000537196.1:96 CR749385:96 ENST00000676416.1:106 BC033094:155 ENST00000674948.1:-269 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_003640 |
| Entrez ID: | 8518 |
| Nearest Unigene: | Hs.494738 |
| Nearest Refseq: | NM_003640 |
| Nearest Ensembl: | ENSG00000070061 |
| Gene Name: | elongator acetyltransferase complex subunit 1 |
| Gene Alias: | DYS|FD|IKAP|IKBKAP|IKI3|TOT1 |
| Gene Description: | elongator complex protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
