Difference between revisions of "TSS:Hg 101896.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-3696 | |distance_to_tss=-3696 | ||
|end=109421490 | |end=109421490 | ||
| Line 9: | Line 9: | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1{{!}}PTPH1 |
| − | |gene_description= | + | |gene_description=protein tyrosine phosphatase non-receptor type 3 |
|gene_name=PTPN3 | |gene_name=PTPN3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 22: | Line 22: | ||
|start_of_center_position=109421479 | |start_of_center_position=109421479 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-38(GGCTATTTATAG,-,0.00),-36(CTATTTATAGGT,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109421479 |
|---|---|
| End of the center position in the TSS region: | 109421480 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -3696 |
|---|---|
| Nearest PromoterID: | NR_026918 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | PTPN3 |
| Gene Alias: | PTP-H1|PTPH1 |
| Gene Description: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -38(GGCTATTTATAG,-,0.00),-36(CTATTTATAGGT,+,0.00) |
