Difference between revisions of "TSS:Hg 101903.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PTPH1= | |PTPH1= | ||
| − | |all_trans=NM_001145372: | + | |all_trans=NM_001145372:66 NM_001145371:66 AK316118:69 AK296388:69 AK296265:212 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=66 |
| − | |distance_to_tss= | + | |distance_to_tss=-71 |
|end=109429048 | |end=109429048 | ||
|end_of_center_position=109429043 | |end_of_center_position=109429043 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1{{!}}PTPH1 |
| − | |gene_description= | + | |gene_description=protein tyrosine phosphatase non-receptor type 3 |
|gene_id=5774 | |gene_id=5774 | ||
| − | |gene_name= | + | |gene_name=protein tyrosine phosphatase non-receptor type 3 |
|gene_source=HGNC:9655 | |gene_source=HGNC:9655 | ||
|gene_symbol=PTPN3 | |gene_symbol=PTPN3 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:9655 | |hgnc_mgi_id=HGNC:9655 | ||
|nearest_ensembl=ENSG00000070159 | |nearest_ensembl=ENSG00000070159 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001145372 |
|nearest_refseq=NM_002829 | |nearest_refseq=NM_002829 | ||
|nearest_unigene=Hs.436429 | |nearest_unigene=Hs.436429 | ||
Revision as of 16:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109429042 |
|---|---|
| End of the center position in the TSS region: | 109429043 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001145372 NM_001145371 |
|---|---|
| Distance: | 66 |
| Num_trans: | 5 |
| All_trans: | NM_001145372:66 NM_001145371:66 AK316118:69 AK296388:69 AK296265:212 |
TATA-Box annotation
| Distance to TSS: | -71 |
|---|---|
| Nearest PromoterID: | NM_001145372 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Alias: | PTP-H1|PTPH1 |
| Gene Description: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
