Difference between revisions of "TSS:Hg 102108.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AF226077:12 AY720898:12 JF432738:12 KJ894010:12 AB527738:12 ENST00000479871 | + | |all_trans=AF226077:12 AY720898:12 JF432738:12 KJ894010:12 AB527738:12 ENST00000479871.1:-28 AK092840:-28 ENST00000475080.1:-35 BC003166:-49 BC004170:-49 AK074782:-59 AK096050:-62 ENST00000374169.7:-67 AK074629:-67 AK074762:-357 ENST00000374171.5:-360 NR_027261:-360 NM_017443:-360 NM_001278255:-434 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=12 | |distance=12 | ||
| − | |distance_to_tss= | + | |distance_to_tss=365 |
|end=113410315 | |end=113410315 | ||
|end_of_center_position=113410310 | |end_of_center_position=113410310 | ||
| − | |entrez_id= | + | |entrez_id=54107 |
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias= | + | |gene_alias=CHARAC17{{!}}CHRAC17{{!}}CHRAC2{{!}}YBL1{{!}}p17 |
| − | |gene_description= | + | |gene_description=DNA polymerase epsilon 3, accessory subunit |
|gene_id=54107 | |gene_id=54107 | ||
| − | |gene_name= | + | |gene_name=DNA polymerase epsilon 3, accessory subunit |
|gene_source=HGNC:13546 | |gene_source=HGNC:13546 | ||
|gene_symbol=POLE3 | |gene_symbol=POLE3 | ||
| − | |gene_synonyms=CHARAC17 CHRAC17 Ybl1 p17 | + | |gene_synonyms=CHARAC17 CHRAC17 CHRAC2 Ybl1 p17 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:13546 | |hgnc_mgi_id=HGNC:13546 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000148229 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_027261 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_017443 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.108112 |
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=113410304 | |start=113410304 | ||
Revision as of 16:55, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 113410309 |
|---|---|
| End of the center position in the TSS region: | 113410310 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF226077 AY720898 JF432738 KJ894010 AB527738 |
|---|---|
| Distance: | 12 |
| Num_trans: | 19 |
| All_trans: | AF226077:12 AY720898:12 JF432738:12 KJ894010:12 AB527738:12 ENST00000479871.1:-28 AK092840:-28 ENST00000475080.1:-35 BC003166:-49 BC004170:-49 AK074782:-59 AK096050:-62 ENST00000374169.7:-67 AK074629:-67 AK074762:-357 ENST00000374171.5:-360 NR_027261:-360 NM_017443:-360 NM_001278255:-434 |
TATA-Box annotation
| Distance to TSS: | 365 |
|---|---|
| Nearest PromoterID: | NR_027261 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | DNA polymerase epsilon 3, accessory subunit |
| Gene Alias: | CHARAC17|CHRAC17|CHRAC2|YBL1|p17 |
| Gene Description: | DNA polymerase epsilon 3, accessory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
