Difference between revisions of "TSS:Hg 102130.1"
From referenceTSS
| Line 8: | Line 8: | ||
|ITILC= | |ITILC= | ||
|UTI= | |UTI= | ||
| − | |all_trans= | + | |all_trans=BC041593:32 AK310776:68 ENST00000603230.1:139 AK310791:139 ENST00000265132.8:167 NM_001633:167 AK290837:167 X04225:186 AY544123:198 X04494:213 AB463406:255 HQ448440:257 KJ890666:257 CU692002:257 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=32 |
| − | |distance_to_tss= | + | |distance_to_tss=-172 |
|end=114078477 | |end=114078477 | ||
|end_of_center_position=114078472 | |end_of_center_position=114078472 | ||
|entrez_id=259 | |entrez_id=259 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=A1M | + | |gene_alias=A1M{{!}}EDC1{{!}}HCP{{!}}HI30{{!}}IATIL{{!}}ITI{{!}}ITIL{{!}}ITILC{{!}}UTI |
|gene_description=alpha-1-microglobulin/bikunin precursor | |gene_description=alpha-1-microglobulin/bikunin precursor | ||
|gene_id=259 | |gene_id=259 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NM_001633 | |nearest_refseq=NM_001633 | ||
|nearest_unigene=Hs.436911 | |nearest_unigene=Hs.436911 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=114078466 | |start=114078466 | ||
|start_of_center_position=114078471 | |start_of_center_position=114078471 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC041593 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102130.1 | |tss_id=hg_102130.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114078471 |
|---|---|
| End of the center position in the TSS region: | 114078472 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC041593 |
|---|---|
| Distance: | 32 |
| Num_trans: | 14 |
| All_trans: | BC041593:32 AK310776:68 ENST00000603230.1:139 AK310791:139 ENST00000265132.8:167 NM_001633:167 AK290837:167 X04225:186 AY544123:198 X04494:213 AB463406:255 HQ448440:257 KJ890666:257 CU692002:257 |
TATA-Box annotation
| Distance to TSS: | -172 |
|---|---|
| Nearest PromoterID: | NM_001633 |
| Entrez ID: | 259 |
| Nearest Unigene: | Hs.436911 |
| Nearest Refseq: | NM_001633 |
| Nearest Ensembl: | ENSG00000106927 |
| Gene Name: | alpha-1-microglobulin/bikunin precursor |
| Gene Alias: | A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI |
| Gene Description: | alpha-1-microglobulin/bikunin precursor |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
