Difference between revisions of "TSS:Hg 102237.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000433546. | + | |all_trans=ENST00000645745.1:0 ENST00000644998.1:0 ENST00000644298.1:0 ENST00000433546.3:2 NR_109805:2 ENST00000646338.1:-64 ENST00000642165.1:377 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-14 | |distance_to_tss=-14 | ||
|end=115744266 | |end=115744266 | ||
| Line 12: | Line 12: | ||
|gene_description=uncharacterized LOC101928775 | |gene_description=uncharacterized LOC101928775 | ||
|gene_id=101928775 | |gene_id=101928775 | ||
| − | |gene_name= | + | |gene_name=LOC101928775 |
|gene_source=EntrezGene:101928775 | |gene_source=EntrezGene:101928775 | ||
|gene_symbol=LOC101928775 | |gene_symbol=LOC101928775 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_109805 | |nearest_refseq=NR_109805 | ||
|nearest_unigene=Hs.522362 | |nearest_unigene=Hs.522362 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=115744240 | |start=115744240 | ||
|start_of_center_position=115744253 | |start_of_center_position=115744253 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-86(GCGTATTAAGAG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000645745.1 ENST00000644998.1 ENST00000644298.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102237.1 | |tss_id=hg_102237.1 | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115744253 |
|---|---|
| End of the center position in the TSS region: | 115744254 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645745.1 ENST00000644998.1 ENST00000644298.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000645745.1:0 ENST00000644998.1:0 ENST00000644298.1:0 ENST00000433546.3:2 NR_109805:2 ENST00000646338.1:-64 ENST00000642165.1:377 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NR_109805 |
| Entrez ID: | 101928775 |
| Nearest Unigene: | Hs.522362 |
| Nearest Refseq: | NR_109805 |
| Nearest Ensembl: | ENSG00000228714 |
| Gene Name: | LOC101928775 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928775 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -86(GCGTATTAAGAG,-,0.00) |
