Difference between revisions of "TSS:Hg 102306.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Fwd2= | |Fwd2= | ||
|Md6= | |Md6= | ||
| − | |all_trans=ENST00000608872. | + | |all_trans=ENST00000608872.6:0 ENST00000453291.1:0 ENST00000476481.1:0 NM_012164:0 NM_001375890:0 NM_001375889:0 NM_001375888:0 BC018738:0 AK300066:0 AK022484:0 AK091860:0 AK314385:0 BC000239:1 AF145024:9 AF193594:9 ENST00000474117.1:11 BC110334:16 AF176698:127 DQ598105:271 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=120793434 | |end=120793434 | ||
|end_of_center_position=120793406 | |end_of_center_position=120793406 | ||
|entrez_id=26190 | |entrez_id=26190 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=FBW2 | + | |gene_alias=FBW2{{!}}Fwd2{{!}}Md6 |
|gene_description=F-box and WD repeat domain containing 2 | |gene_description=F-box and WD repeat domain containing 2 | ||
|gene_id=26190 | |gene_id=26190 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_012164 | |nearest_refseq=NM_012164 | ||
|nearest_unigene=Hs.494985 | |nearest_unigene=Hs.494985 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=120793377 | |start=120793377 | ||
|start_of_center_position=120793405 | |start_of_center_position=120793405 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000608872. | + | |transcript_name=ENST00000608872.6 ENST00000453291.1 ENST00000476481.1 NM_012164 NM_001375890 NM_001375889 NM_001375888 BC018738 AK300066 AK022484 AK091860 AK314385 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102306.1 | |tss_id=hg_102306.1 | ||
Revision as of 17:00, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120793405 |
|---|---|
| End of the center position in the TSS region: | 120793406 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000608872.6 ENST00000453291.1 ENST00000476481.1 NM_012164 NM_001375890 NM_001375889 NM_001375888 BC018738 AK300066 AK022484 AK091860 AK314385 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000608872.6:0 ENST00000453291.1:0 ENST00000476481.1:0 NM_012164:0 NM_001375890:0 NM_001375889:0 NM_001375888:0 BC018738:0 AK300066:0 AK022484:0 AK091860:0 AK314385:0 BC000239:1 AF145024:9 AF193594:9 ENST00000474117.1:11 BC110334:16 AF176698:127 DQ598105:271 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_012164 |
| Entrez ID: | 26190 |
| Nearest Unigene: | Hs.494985 |
| Nearest Refseq: | NM_012164 |
| Nearest Ensembl: | ENSG00000119402 |
| Gene Name: | F-box and WD repeat domain containing 2 |
| Gene Alias: | FBW2|Fwd2|Md6 |
| Gene Description: | F-box and WD repeat domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
