Difference between revisions of "TSS:Hg 10250.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB021262:-87 BC035794:-89 BC046920:-102 BC014300:-104 NM_001012329:- | + | |all_trans=AB021262:-87 BC035794:-89 BC046920:-102 BC014300:-104 ENST00000377263.6:-132 NM_001012329:-132 NM_020248:-132 ENST00000400904.7:-199 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
|distance=-87 | |distance=-87 | ||
| − | |distance_to_tss= | + | |distance_to_tss=132 |
|end=9910137 | |end=9910137 | ||
|end_of_center_position=9910137 | |end_of_center_position=9910137 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_020248 | |nearest_refseq=NM_020248 | ||
|nearest_unigene=Hs.463759 | |nearest_unigene=Hs.463759 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=9910136 | |start=9910136 | ||
Revision as of 17:05, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9910136 |
|---|---|
| End of the center position in the TSS region: | 9910137 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB021262 |
|---|---|
| Distance: | -87 |
| Num_trans: | 8 |
| All_trans: | AB021262:-87 BC035794:-89 BC046920:-102 BC014300:-104 ENST00000377263.6:-132 NM_001012329:-132 NM_020248:-132 ENST00000400904.7:-199 |
TATA-Box annotation
| Distance to TSS: | 132 |
|---|---|
| Nearest PromoterID: | NM_020248 |
| Entrez ID: | 56998 |
| Nearest Unigene: | Hs.463759 |
| Nearest Refseq: | NM_020248 |
| Nearest Ensembl: | ENSG00000178585 |
| Gene Name: | catenin beta interacting protein 1 |
| Gene Alias: | ICAT |
| Gene Description: | catenin beta interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.845771 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
