Difference between revisions of "TSS:Hg 102531.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HARP= | |HARP= | ||
| − | |all_trans=ENST00000470194 | + | |all_trans=LF346906:16 MA582483:16 ENST00000470194.1:43 ENST00000491991.1:46 AK075026:57 LF346904:-85 MA582481:-85 LF346907:105 MA582484:105 LF346902:-242 MA582479:-242 LF346901:-337 MA582478:-337 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=16 |
| − | |distance_to_tss= | + | |distance_to_tss=14539 |
|end=127108102 | |end=127108102 | ||
|end_of_center_position=127108096 | |end_of_center_position=127108096 | ||
|entrez_id=23452 | |entrez_id=23452 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=ARP2 | + | |gene_alias=ARP2{{!}}HARP |
|gene_description=angiopoietin like 2 | |gene_description=angiopoietin like 2 | ||
|gene_id=23452 | |gene_id=23452 | ||
| − | |gene_name= | + | |gene_name=ANGPTL2 |
|gene_source=HGNC:490 | |gene_source=HGNC:490 | ||
|gene_symbol=ANGPTL2 | |gene_symbol=ANGPTL2 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_012098 | |nearest_refseq=NM_012098 | ||
|nearest_unigene=Hs.653262 | |nearest_unigene=Hs.653262 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=127108089 | |start=127108089 | ||
|start_of_center_position=127108095 | |start_of_center_position=127108095 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF346906 MA582483 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102531.1 | |tss_id=hg_102531.1 | ||
Latest revision as of 17:06, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127108095 |
|---|---|
| End of the center position in the TSS region: | 127108096 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF346906 MA582483 |
|---|---|
| Distance: | 16 |
| Num_trans: | 13 |
| All_trans: | LF346906:16 MA582483:16 ENST00000470194.1:43 ENST00000491991.1:46 AK075026:57 LF346904:-85 MA582481:-85 LF346907:105 MA582484:105 LF346902:-242 MA582479:-242 LF346901:-337 MA582478:-337 |
TATA-Box annotation
| Distance to TSS: | 14539 |
|---|---|
| Nearest PromoterID: | NM_012098 |
| Entrez ID: | 23452 |
| Nearest Unigene: | Hs.653262 |
| Nearest Refseq: | NM_012098 |
| Nearest Ensembl: | ENSG00000136859 |
| Gene Name: | ANGPTL2 |
| Gene Alias: | ARP2|HARP |
| Gene Description: | angiopoietin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
