Difference between revisions of "TSS:Hg 102693.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NEAS= | |NEAS= | ||
|SPTA2= | |SPTA2= | ||
| − | |all_trans=ENST00000434999. | + | |all_trans=ENST00000434999.2:0 ENST00000660288.1:0 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-181 |
|end=128552423 | |end=128552423 | ||
|end_of_center_position=128552406 | |end_of_center_position=128552406 | ||
|entrez_id=6709 | |entrez_id=6709 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=EIEE5 | + | |gene_alias=EIEE5{{!}}NEAS{{!}}SPTA2 |
| − | |gene_description= | + | |gene_description=spectrin alpha, non-erythrocytic 1 |
|gene_name=SPTAN1 | |gene_name=SPTAN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 24: | Line 24: | ||
|start_of_center_position=128552405 | |start_of_center_position=128552405 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000434999. | + | |transcript_name=ENST00000434999.2 ENST00000660288.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102693.1 | |tss_id=hg_102693.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128552405 |
|---|---|
| End of the center position in the TSS region: | 128552406 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000434999.2 ENST00000660288.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000434999.2:0 ENST00000660288.1:0 |
TATA-Box annotation
| Distance to TSS: | -181 |
|---|---|
| Nearest PromoterID: | NM_001130438 |
| Entrez ID: | 6709 |
| Nearest Unigene: | Hs.372331 |
| Nearest Refseq: | NM_003127 |
| Nearest Ensembl: | ENSG00000197694 |
| Gene Name: | SPTAN1 |
| Gene Alias: | EIEE5|NEAS|SPTA2 |
| Gene Description: | spectrin alpha, non-erythrocytic 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
