Difference between revisions of "TSS:Hg 102766.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|DYT1= | |DYT1= | ||
| − | |all_trans=ENST00000351698. | + | |all_trans=ENST00000351698.5:0 ENST00000473084.1:0 NM_000113:0 AK075343:0 AK056062:0 AF007871:0 BC000674:0 AK314505:0 BC014484:0 KJ896739:12 KR709744:12 KR709745:12 KJ901397:12 DQ892657:13 DQ895897:13 AB590352:14 BT006931:15 ENST00000651202.1:-90 AK294677:-96 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=9 |
|end=129824154 | |end=129824154 | ||
|end_of_center_position=129824127 | |end_of_center_position=129824127 | ||
|entrez_id=1861 | |entrez_id=1861 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=DQ2 | + | |gene_alias=DQ2{{!}}DYT1 |
|gene_description=torsin family 1 member A | |gene_description=torsin family 1 member A | ||
|gene_id=1861 | |gene_id=1861 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_000113 | |nearest_refseq=NM_000113 | ||
|nearest_unigene=Hs.534312 | |nearest_unigene=Hs.534312 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=129824099 | |start=129824099 | ||
|start_of_center_position=129824126 | |start_of_center_position=129824126 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000351698. | + | |transcript_name=ENST00000351698.5 ENST00000473084.1 NM_000113 AK075343 AK056062 AF007871 BC000674 AK314505 BC014484 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102766.1 | |tss_id=hg_102766.1 | ||
Revision as of 17:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129824126 |
|---|---|
| End of the center position in the TSS region: | 129824127 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000351698.5 ENST00000473084.1 NM_000113 AK075343 AK056062 AF007871 BC000674 AK314505 BC014484 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000351698.5:0 ENST00000473084.1:0 NM_000113:0 AK075343:0 AK056062:0 AF007871:0 BC000674:0 AK314505:0 BC014484:0 KJ896739:12 KR709744:12 KR709745:12 KJ901397:12 DQ892657:13 DQ895897:13 AB590352:14 BT006931:15 ENST00000651202.1:-90 AK294677:-96 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_000113 |
| Entrez ID: | 1861 |
| Nearest Unigene: | Hs.534312 |
| Nearest Refseq: | NM_000113 |
| Nearest Ensembl: | ENSG00000136827 |
| Gene Name: | torsin family 1 member A |
| Gene Alias: | DQ2|DYT1 |
| Gene Description: | torsin family 1 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
