Difference between revisions of "TSS:Hg 102859.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=53401 | |distance_to_tss=53401 | ||
|end=131656448 | |end=131656448 | ||
| Line 9: | Line 9: | ||
|entrez_id=2889 | |entrez_id=2889 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=C3G | + | |gene_alias=C3G{{!}}GRF2 |
|gene_description=Rap guanine nucleotide exchange factor 1 | |gene_description=Rap guanine nucleotide exchange factor 1 | ||
|gene_name=RAPGEF1 | |gene_name=RAPGEF1 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=131656441 | |start_of_center_position=131656441 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=34(TCTTTTAGGGAC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 131656441 |
|---|---|
| End of the center position in the TSS region: | 131656442 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 53401 |
|---|---|
| Nearest PromoterID: | NM_198679 |
| Entrez ID: | 2889 |
| Nearest Unigene: | Hs.127897 |
| Nearest Refseq: | NM_005312 |
| Nearest Ensembl: | ENSG00000107263 |
| Gene Name: | RAPGEF1 |
| Gene Alias: | C3G|GRF2 |
| Gene Description: | Rap guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 34(TCTTTTAGGGAC,+,0.00) |
