Difference between revisions of "TSS:Hg 102899.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-24648 | |distance_to_tss=-24648 | ||
|end=132557959 | |end=132557959 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=132557957 | |start_of_center_position=132557957 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=0(CACTCTAAAAGA,-,0.00),43(GCTTATAAACTC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132557957 |
|---|---|
| End of the center position in the TSS region: | 132557958 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -24648 |
|---|---|
| Nearest PromoterID: | NM_020064 |
| Entrez ID: | 56751 |
| Nearest Unigene: | Hs.283809 |
| Nearest Refseq: | NM_020064 |
| Nearest Ensembl: | ENSG00000125492 |
| Gene Name: | BARHL1 |
| Gene Alias: | - |
| Gene Description: | BarH like homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 0(CACTCTAAAAGA,-,0.00),43(GCTTATAAACTC,+,0.00) |
