Difference between revisions of "TSS:Hg 102917.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Mast= | |Mast= | ||
| + | |all_trans=LP986442:56 MA014102:56 LP986443:176 MA014103:176 ENST00000647534.1:417 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=56 |
| − | |distance_to_tss= | + | |distance_to_tss=32726 |
|end=132911625 | |end=132911625 | ||
|end_of_center_position=132911624 | |end_of_center_position=132911624 | ||
|entrez_id=11092 | |entrez_id=11092 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| − | |gene_alias=C9orf9 | + | |gene_alias=C9orf9{{!}}Mast |
|gene_description=sperm acrosome associated 9 | |gene_description=sperm acrosome associated 9 | ||
|gene_name=SPACA9 | |gene_name=SPACA9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000165698 | |nearest_ensembl=ENSG00000165698 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001316897 |
|nearest_refseq=NM_018956 | |nearest_refseq=NM_018956 | ||
|nearest_unigene=Hs.62595 | |nearest_unigene=Hs.62595 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=132911622 | |start=132911622 | ||
|start_of_center_position=132911623 | |start_of_center_position=132911623 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LP986442 MA014102 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102917.1 | |tss_id=hg_102917.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:14, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 132911623 |
|---|---|
| End of the center position in the TSS region: | 132911624 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LP986442 MA014102 |
|---|---|
| Distance: | 56 |
| Num_trans: | 5 |
| All_trans: | LP986442:56 MA014102:56 LP986443:176 MA014103:176 ENST00000647534.1:417 |
TATA-Box annotation
| Distance to TSS: | 32726 |
|---|---|
| Nearest PromoterID: | NM_001316897 |
| Entrez ID: | 11092 |
| Nearest Unigene: | Hs.62595 |
| Nearest Refseq: | NM_018956 |
| Nearest Ensembl: | ENSG00000165698 |
| Gene Name: | SPACA9 |
| Gene Alias: | C9orf9|Mast |
| Gene Description: | sperm acrosome associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
