Difference between revisions of "TSS:Hg 102983.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000372022.6:0 NM_006753:0 NR_103874:0 NM_001278942:0 AK054884:0 BC014878:9 EU831789:29 EU831867:29 BC003001:33 BC006197:33 KJ892233:37 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-6 |
|end=133336218 | |end=133336218 | ||
|end_of_center_position=133336194 | |end_of_center_position=133336194 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:11478 | |hgnc_mgi_id=HGNC:11478 | ||
|nearest_ensembl=ENSG00000148296 | |nearest_ensembl=ENSG00000148296 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006753 |
|nearest_refseq=NM_006753 | |nearest_refseq=NM_006753 | ||
|nearest_unigene=Hs.274430 | |nearest_unigene=Hs.274430 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=133336169 | |start=133336169 | ||
|start_of_center_position=133336193 | |start_of_center_position=133336193 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_103874 | + | |transcript_name=ENST00000372022.6 NM_006753 NR_103874 NM_001278942 AK054884 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102983.1 | |tss_id=hg_102983.1 | ||
Revision as of 17:16, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133336193 |
|---|---|
| End of the center position in the TSS region: | 133336194 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372022.6 NM_006753 NR_103874 NM_001278942 AK054884 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000372022.6:0 NM_006753:0 NR_103874:0 NM_001278942:0 AK054884:0 BC014878:9 EU831789:29 EU831867:29 BC003001:33 BC006197:33 KJ892233:37 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_006753 |
| Entrez ID: | 6838 |
| Nearest Unigene: | Hs.274430 |
| Nearest Refseq: | NM_006753 |
| Nearest Ensembl: | ENSG00000148296 |
| Gene Name: | surfeit 6 |
| Gene Alias: | RRP14 |
| Gene Description: | surfeit 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
