Difference between revisions of "TSS:Hg 103052.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|RING3L= | |RING3L= | ||
| − | |all_trans=ENST00000371834.6 | + | |all_trans=ENST00000371834.6:0 AK299519:0 BC032124:0 ENST00000303407.12:468 NM_007371:468 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-501 |
|end=134068560 | |end=134068560 | ||
|end_of_center_position=134068527 | |end_of_center_position=134068527 | ||
|entrez_id=8019 | |entrez_id=8019 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=ORFX | + | |gene_alias=ORFX{{!}}RING3L |
|gene_description=bromodomain containing 3 | |gene_description=bromodomain containing 3 | ||
|gene_id=8019 | |gene_id=8019 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_007371 | |nearest_refseq=NM_007371 | ||
|nearest_unigene=Hs.522472 | |nearest_unigene=Hs.522472 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=134068493 | |start=134068493 | ||
|start_of_center_position=134068526 | |start_of_center_position=134068526 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371834.6 | + | |transcript_name=ENST00000371834.6 AK299519 BC032124 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103052.1 | |tss_id=hg_103052.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DS09 | + | |uniprot_id=A0A140F1N4 B4DS09 |
}} | }} | ||
Revision as of 17:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 134068526 |
|---|---|
| End of the center position in the TSS region: | 134068527 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371834.6 AK299519 BC032124 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000371834.6:0 AK299519:0 BC032124:0 ENST00000303407.12:468 NM_007371:468 |
TATA-Box annotation
| Distance to TSS: | -501 |
|---|---|
| Nearest PromoterID: | NM_007371 |
| Entrez ID: | 8019 |
| Nearest Unigene: | Hs.522472 |
| Nearest Refseq: | NM_007371 |
| Nearest Ensembl: | ENSG00000169925 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | ORFX|RING3L |
| Gene Description: | bromodomain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
