Difference between revisions of "TSS:Hg 103070.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-23821 | |distance_to_tss=-23821 | ||
|end=134617985 | |end=134617985 | ||
| Line 8: | Line 8: | ||
|entrez_id=1289 | |entrez_id=1289 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=EDSC | + | |gene_alias=EDSC{{!}}EDSCL1 |
|gene_description=collagen type V alpha 1 chain | |gene_description=collagen type V alpha 1 chain | ||
|gene_name=COL5A1 | |gene_name=COL5A1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000130635 | |nearest_ensembl=ENSG00000130635 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000093 |
|nearest_refseq=NM_000093 | |nearest_refseq=NM_000093 | ||
|nearest_unigene=Hs.210283 | |nearest_unigene=Hs.210283 | ||
Latest revision as of 17:18, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 134617984 |
|---|---|
| End of the center position in the TSS region: | 134617985 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -23821 |
|---|---|
| Nearest PromoterID: | NM_000093 |
| Entrez ID: | 1289 |
| Nearest Unigene: | Hs.210283 |
| Nearest Refseq: | NM_000093 |
| Nearest Ensembl: | ENSG00000130635 |
| Gene Name: | COL5A1 |
| Gene Alias: | EDSC|EDSCL1 |
| Gene Description: | collagen type V alpha 1 chain |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
