Difference between revisions of "TSS:Hg 103158.1"
From referenceTSS
| Line 3: | Line 3: | ||
|P-55= | |P-55= | ||
|SCAR2= | |SCAR2= | ||
| − | |all_trans=ENST00000371723.4 | + | |all_trans=ENST00000371723.4:0 ENST00000371725.7:-6 ENST00000298537.11:-15 ENST00000357365.8:-20 NM_006643:-20 NM_001039708:-20 NM_001039707:-20 BC014515:85 ENST00000446833.1:286 DQ893083:419 DQ896349:419 AY349357:419 KJ902160:419 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| Line 12: | Line 12: | ||
|entrez_id=23203 | |entrez_id=23203 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=Alpha-MPP | + | |gene_alias=Alpha-MPP{{!}}CLA1{{!}}CPD3{{!}}INPP5E{{!}}P-55{{!}}SCAR2 |
| − | |gene_description= | + | |gene_description=peptidase, mitochondrial processing alpha subunit |
|gene_id=10807 | |gene_id=10807 | ||
| − | |gene_name= | + | |gene_name=endosome associated trafficking regulator 1 |
|gene_source=HGNC:10667 | |gene_source=HGNC:10667 | ||
| − | |gene_symbol= | + | |gene_symbol=ENTR1 |
|gene_synonyms=NY-CO-3 | |gene_synonyms=NY-CO-3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:10667 | |hgnc_mgi_id=HGNC:10667 | ||
|nearest_ensembl=ENSG00000165688 | |nearest_ensembl=ENSG00000165688 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282946 |
|nearest_refseq=NM_015160 | |nearest_refseq=NM_015160 | ||
|nearest_unigene=Hs.495471 | |nearest_unigene=Hs.495471 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=136410553 | |start=136410553 | ||
|start_of_center_position=136410573 | |start_of_center_position=136410573 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371723.4 | + | |transcript_name=ENST00000371723.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103158.1 | |tss_id=hg_103158.1 | ||
Revision as of 17:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136410573 |
|---|---|
| End of the center position in the TSS region: | 136410574 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371723.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000371723.4:0 ENST00000371725.7:-6 ENST00000298537.11:-15 ENST00000357365.8:-20 NM_006643:-20 NM_001039708:-20 NM_001039707:-20 BC014515:85 ENST00000446833.1:286 DQ893083:419 DQ896349:419 AY349357:419 KJ902160:419 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001282946 |
| Entrez ID: | 23203 |
| Nearest Unigene: | Hs.495471 |
| Nearest Refseq: | NM_015160 |
| Nearest Ensembl: | ENSG00000165688 |
| Gene Name: | endosome associated trafficking regulator 1 |
| Gene Alias: | Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2 |
| Gene Description: | peptidase, mitochondrial processing alpha subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
