Difference between revisions of "TSS:Hg 103191.1"
From referenceTSS
| Line 4: | Line 4: | ||
|LPAAB= | |LPAAB= | ||
|LPAAT-beta= | |LPAAT-beta= | ||
| + | |all_trans=LF346441:-246 MA582018:-246 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-246 |
| − | |distance_to_tss= | + | |distance_to_tss=1261 |
|end=136686201 | |end=136686201 | ||
|end_of_center_position=136686196 | |end_of_center_position=136686196 | ||
|entrez_id=10555 | |entrez_id=10555 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=1-AGPAT2 | + | |gene_alias=1-AGPAT2{{!}}BSCL{{!}}BSCL1{{!}}LPAAB{{!}}LPAAT-beta |
|gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | |gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | ||
|gene_name=AGPAT2 | |gene_name=AGPAT2 | ||
| Line 20: | Line 21: | ||
|nearest_refseq=NM_006412 | |nearest_refseq=NM_006412 | ||
|nearest_unigene=Hs.320151 | |nearest_unigene=Hs.320151 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=136686190 | |start=136686190 | ||
|start_of_center_position=136686195 | |start_of_center_position=136686195 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF346441 MA582018 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103191.1 | |tss_id=hg_103191.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136686195 |
|---|---|
| End of the center position in the TSS region: | 136686196 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF346441 MA582018 |
|---|---|
| Distance: | -246 |
| Num_trans: | 2 |
| All_trans: | LF346441:-246 MA582018:-246 |
TATA-Box annotation
| Distance to TSS: | 1261 |
|---|---|
| Nearest PromoterID: | NM_001012727 |
| Entrez ID: | 10555 |
| Nearest Unigene: | Hs.320151 |
| Nearest Refseq: | NM_006412 |
| Nearest Ensembl: | ENSG00000169692 |
| Gene Name: | AGPAT2 |
| Gene Alias: | 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta |
| Gene Description: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
