Difference between revisions of "TSS:Hg 103193.1"
From referenceTSS
| Line 4: | Line 4: | ||
|LPAAB= | |LPAAB= | ||
|LPAAT-beta= | |LPAAT-beta= | ||
| − | |all_trans=NM_001012727:0 NM_006412:0 | + | |all_trans=ENST00000371696.7:0 NM_001012727:0 NM_006412:0 LF383683:0 MA619260:0 AF000237:2 AF011374:8 BC000026:23 HM005456:26 ENST00000371694.7:27 ENST00000538402.1:29 U56418:29 BC019292:31 BC004529:32 ENST00000470861.1:60 DQ892146:66 DQ895342:66 KJ906048:67 KJ898240:67 KJ902127:67 KR710265:67 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=3 |
|end=136687483 | |end=136687483 | ||
|end_of_center_position=136687454 | |end_of_center_position=136687454 | ||
|entrez_id=10555 | |entrez_id=10555 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=1-AGPAT2 | + | |gene_alias=1-AGPAT2{{!}}BSCL{{!}}BSCL1{{!}}LPAAB{{!}}LPAAT-beta |
|gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | |gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | ||
|gene_id=10555 | |gene_id=10555 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_006412 | |nearest_refseq=NM_006412 | ||
|nearest_unigene=Hs.320151 | |nearest_unigene=Hs.320151 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=136687424 | |start=136687424 | ||
|start_of_center_position=136687453 | |start_of_center_position=136687453 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001012727 NM_006412 | + | |transcript_name=ENST00000371696.7 NM_001012727 NM_006412 LF383683 MA619260 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103193.1 | |tss_id=hg_103193.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=O15120 | + | |uniprot_id=A0A024R8I7 O15120 |
}} | }} | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 136687453 |
|---|---|
| End of the center position in the TSS region: | 136687454 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371696.7 NM_001012727 NM_006412 LF383683 MA619260 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000371696.7:0 NM_001012727:0 NM_006412:0 LF383683:0 MA619260:0 AF000237:2 AF011374:8 BC000026:23 HM005456:26 ENST00000371694.7:27 ENST00000538402.1:29 U56418:29 BC019292:31 BC004529:32 ENST00000470861.1:60 DQ892146:66 DQ895342:66 KJ906048:67 KJ898240:67 KJ902127:67 KR710265:67 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001012727 |
| Entrez ID: | 10555 |
| Nearest Unigene: | Hs.320151 |
| Nearest Refseq: | NM_006412 |
| Nearest Ensembl: | ENSG00000169692 |
| Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Alias: | 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta |
| Gene Description: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
