Difference between revisions of "TSS:Hg 103199.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000480584.1:0 ENST00000471509.5:0 ENST00000497749.5:0 ENST00000494091.5:0 ENST00000480347 | + | |all_trans=ENST00000480584.1:0 ENST00000471509.5:0 ENST00000497749.5:0 ENST00000494091.5:0 ENST00000480347.1:0 ENST00000476567.1:-167 BC040937:-167 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_033913 | |nearest_refseq=NR_033913 | ||
|nearest_unigene=Hs.679904 | |nearest_unigene=Hs.679904 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=136745848 | |start=136745848 | ||
|start_of_center_position=136745851 | |start_of_center_position=136745851 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000480584.1 ENST00000471509.5 ENST00000497749.5 ENST00000494091.5 ENST00000480347 | + | |transcript_name=ENST00000480584.1 ENST00000471509.5 ENST00000497749.5 ENST00000494091.5 ENST00000480347.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103199.1 | |tss_id=hg_103199.1 | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 136745851 |
|---|---|
| End of the center position in the TSS region: | 136745852 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000480584.1 ENST00000471509.5 ENST00000497749.5 ENST00000494091.5 ENST00000480347.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000480584.1:0 ENST00000471509.5:0 ENST00000497749.5:0 ENST00000494091.5:0 ENST00000480347.1:0 ENST00000476567.1:-167 BC040937:-167 |
TATA-Box annotation
| Distance to TSS: | -309 |
|---|---|
| Nearest PromoterID: | NR_033913 |
| Entrez ID: | 100128593 |
| Nearest Unigene: | Hs.679904 |
| Nearest Refseq: | NR_033913 |
| Nearest Ensembl: | |
| Gene Name: | lipocalin 6 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128593 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
