Difference between revisions of "TSS:Hg 103200.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000476567 | + | |all_trans=ENST00000476567.1:-3 BC040937:-3 ENST00000480584.1:154 ENST00000471509.5:155 ENST00000497749.5:156 ENST00000494091.5:156 ENST00000480347.1:158 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_033913 | |nearest_refseq=NR_033913 | ||
|nearest_unigene=Hs.679904 | |nearest_unigene=Hs.679904 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=136746006 | |start=136746006 | ||
|start_of_center_position=136746012 | |start_of_center_position=136746012 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000476567 | + | |transcript_name=ENST00000476567.1 BC040937 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103200.1 | |tss_id=hg_103200.1 | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136746012 |
|---|---|
| End of the center position in the TSS region: | 136746013 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000476567.1 BC040937 |
|---|---|
| Distance: | -3 |
| Num_trans: | 7 |
| All_trans: | ENST00000476567.1:-3 BC040937:-3 ENST00000480584.1:154 ENST00000471509.5:155 ENST00000497749.5:156 ENST00000494091.5:156 ENST00000480347.1:158 |
TATA-Box annotation
| Distance to TSS: | -148 |
|---|---|
| Nearest PromoterID: | NR_033913 |
| Entrez ID: | 100128593 |
| Nearest Unigene: | Hs.679904 |
| Nearest Refseq: | NR_033913 |
| Nearest Ensembl: | |
| Gene Name: | lipocalin 6 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128593 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
