Difference between revisions of "TSS:Hg 103353.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000471784.2:18 AK097419:18 AY604177:18 ENST00000344774.6:37 NM_001001710:37 ENST00000484720.1:38 BC132916:51 BC132918:51 KJ896256:73 HQ258370:74 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=18 |
| − | |distance_to_tss= | + | |distance_to_tss=-40 |
|end=137247794 | |end=137247794 | ||
|end_of_center_position=137247791 | |end_of_center_position=137247791 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001001710 | |nearest_refseq=NM_001001710 | ||
|nearest_unigene=Hs.522530 | |nearest_unigene=Hs.522530 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=137247787 | |start=137247787 | ||
|start_of_center_position=137247790 | |start_of_center_position=137247790 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000471784.2 AK097419 AY604177 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103353.1 | |tss_id=hg_103353.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:24, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 137247790 |
|---|---|
| End of the center position in the TSS region: | 137247791 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000471784.2 AK097419 AY604177 |
|---|---|
| Distance: | 18 |
| Num_trans: | 10 |
| All_trans: | ENST00000471784.2:18 AK097419:18 AY604177:18 ENST00000344774.6:37 NM_001001710:37 ENST00000484720.1:38 BC132916:51 BC132918:51 KJ896256:73 HQ258370:74 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NM_001001710 |
| Entrez ID: | 401565 |
| Nearest Unigene: | Hs.522530 |
| Nearest Refseq: | NM_001001710 |
| Nearest Ensembl: | ENSG00000188163 |
| Gene Name: | family with sequence similarity 166 member A |
| Gene Alias: | HSD46 |
| Gene Description: | family with sequence similarity 166 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
