Difference between revisions of "TSS:Hg 103461.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000653889.1:-221 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-221 |
|distance_to_tss=56531 | |distance_to_tss=56531 | ||
|end=1957825 | |end=1957825 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NR_040253 | |nearest_refseq=NR_040253 | ||
|nearest_unigene=Hs.576810 | |nearest_unigene=Hs.576810 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=1957809 | |start=1957809 | ||
|start_of_center_position=1957817 | |start_of_center_position=1957817 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000653889.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103461.1 | |tss_id=hg_103461.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1957817 |
|---|---|
| End of the center position in the TSS region: | 1957818 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000653889.1 |
|---|---|
| Distance: | -221 |
| Num_trans: | 1 |
| All_trans: | ENST00000653889.1:-221 |
TATA-Box annotation
| Distance to TSS: | 56531 |
|---|---|
| Nearest PromoterID: | NR_040253 |
| Entrez ID: | 282980 |
| Nearest Unigene: | Hs.576810 |
| Nearest Refseq: | NR_040253 |
| Nearest Ensembl: | ENSG00000234962 |
| Gene Name: | LINC00700 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 700 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
