Difference between revisions of "TSS:Hg 103500.1"
From referenceTSS
| Line 7: | Line 7: | ||
|ST12= | |ST12= | ||
|ZF9= | |ZF9= | ||
| + | |all_trans=ENST00000670656.1:198 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=198 |
| − | |distance_to_tss= | + | |distance_to_tss=27421 |
|end=3757789 | |end=3757789 | ||
|end_of_center_position=3757788 | |end_of_center_position=3757788 | ||
|entrez_id=1316 | |entrez_id=1316 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=BCD1 | + | |gene_alias=BCD1{{!}}CBA1{{!}}COPEB{{!}}CPBP{{!}}GBF{{!}}PAC1{{!}}ST12{{!}}ZF9 |
|gene_description=Kruppel like factor 6 | |gene_description=Kruppel like factor 6 | ||
|gene_name=KLF6 | |gene_name=KLF6 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_001300 | |nearest_refseq=NM_001300 | ||
|nearest_unigene=Hs.4055 | |nearest_unigene=Hs.4055 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=3757786 | |start=3757786 | ||
|start_of_center_position=3757787 | |start_of_center_position=3757787 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000670656.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103500.1 | |tss_id=hg_103500.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:28, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3757787 |
|---|---|
| End of the center position in the TSS region: | 3757788 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000670656.1 |
|---|---|
| Distance: | 198 |
| Num_trans: | 1 |
| All_trans: | ENST00000670656.1:198 |
TATA-Box annotation
| Distance to TSS: | 27421 |
|---|---|
| Nearest PromoterID: | NM_001300 |
| Entrez ID: | 1316 |
| Nearest Unigene: | Hs.4055 |
| Nearest Refseq: | NM_001300 |
| Nearest Ensembl: | ENSG00000067082 |
| Gene Name: | KLF6 |
| Gene Alias: | BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 |
| Gene Description: | Kruppel like factor 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
