Difference between revisions of "TSS:Hg 103544.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=18611 | |distance_to_tss=18611 | ||
|end=3852575 | |end=3852575 | ||
| Line 9: | Line 9: | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2639 |
| − | |gene_name= | + | |gene_name=LINC02639 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000230573 | |nearest_ensembl=ENSG00000230573 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=3852560 | |start_of_center_position=3852560 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=57(GGCTTTATAGGT,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3852560 |
|---|---|
| End of the center position in the TSS region: | 3852561 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 18611 |
|---|---|
| Nearest PromoterID: | NR_134490 |
| Entrez ID: | 105376365 |
| Nearest Unigene: | Hs.460114 |
| Nearest Refseq: | NR_134490 |
| Nearest Ensembl: | ENSG00000230573 |
| Gene Name: | LINC02639 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2639 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 57(GGCTTTATAGGT,-,0.00) |
