Difference between revisions of "TSS:Hg 103647.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK313934:0 M58026:0 BC031889:12 | + | |all_trans=ENST00000315238.3:0 NM_005185:0 AK313934:0 M58026:0 BC031889:12 KJ890815:113 AB590316:116 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=5524969 | |end=5524969 | ||
|end_of_center_position=5524962 | |end_of_center_position=5524962 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005185 | |nearest_refseq=NM_005185 | ||
|nearest_unigene=Hs.239600 | |nearest_unigene=Hs.239600 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=5524953 | |start=5524953 | ||
|start_of_center_position=5524961 | |start_of_center_position=5524961 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK313934 M58026 | + | |transcript_name=ENST00000315238.3 NM_005185 AK313934 M58026 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103647.1 | |tss_id=hg_103647.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P27482 |
}} | }} | ||
Revision as of 17:31, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5524961 |
|---|---|
| End of the center position in the TSS region: | 5524962 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000315238.3 NM_005185 AK313934 M58026 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000315238.3:0 NM_005185:0 AK313934:0 M58026:0 BC031889:12 KJ890815:113 AB590316:116 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_005185 |
| Entrez ID: | 810 |
| Nearest Unigene: | Hs.239600 |
| Nearest Refseq: | NM_005185 |
| Nearest Ensembl: | ENSG00000178363 |
| Gene Name: | calmodulin like 3 |
| Gene Alias: | CLP |
| Gene Description: | calmodulin like 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
