Difference between revisions of "TSS:Hg 103651.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000328090.9:95 NM_017782:95 | + | |all_trans=ENST00000328090.9:95 NM_001321783:95 NM_001321785:95 NM_001321784:95 NM_017782:95 NR_135800:95 CR936780:95 ENST00000477043.5:199 ENST00000473789.5:199 ENST00000496681.5:205 ENST00000480839.6:222 |
|bA318E3.2= | |bA318E3.2= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 10: | Line 10: | ||
|entrez_id=54906 | |entrez_id=54906 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=C10orf18 | + | |gene_alias=C10orf18{{!}}FAM208B{{!}}bA318E3.2 |
| − | |gene_description=family | + | |gene_description=transcription activation suppressor family member 2 |
|gene_id=54906 | |gene_id=54906 | ||
| − | |gene_name=family | + | |gene_name=transcription activation suppressor family member 2 |
|gene_source=HGNC:23484 | |gene_source=HGNC:23484 | ||
| − | |gene_symbol= | + | |gene_symbol=TASOR2 |
|gene_synonyms=FLJ20360 KIAA2006 bA318E3.2 | |gene_synonyms=FLJ20360 KIAA2006 bA318E3.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:23484 | |hgnc_mgi_id=HGNC:23484 | ||
|nearest_ensembl=ENSG00000108021 | |nearest_ensembl=ENSG00000108021 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001321785 |
|nearest_refseq=NM_017782 | |nearest_refseq=NM_017782 | ||
|nearest_unigene=Hs.610717 | |nearest_unigene=Hs.610717 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=5684714 | |start=5684714 | ||
|start_of_center_position=5684728 | |start_of_center_position=5684728 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000328090.9 NM_017782 | + | |transcript_name=ENST00000328090.9 NM_001321783 NM_001321785 NM_001321784 NM_017782 NR_135800 CR936780 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103651.1 | |tss_id=hg_103651.1 | ||
Revision as of 17:32, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5684728 |
|---|---|
| End of the center position in the TSS region: | 5684729 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000328090.9 NM_001321783 NM_001321785 NM_001321784 NM_017782 NR_135800 CR936780 |
|---|---|
| Distance: | 95 |
| Num_trans: | 11 |
| All_trans: | ENST00000328090.9:95 NM_001321783:95 NM_001321785:95 NM_001321784:95 NM_017782:95 NR_135800:95 CR936780:95 ENST00000477043.5:199 ENST00000473789.5:199 ENST00000496681.5:205 ENST00000480839.6:222 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NM_001321785 |
| Entrez ID: | 54906 |
| Nearest Unigene: | Hs.610717 |
| Nearest Refseq: | NM_017782 |
| Nearest Ensembl: | ENSG00000108021 |
| Gene Name: | transcription activation suppressor family member 2 |
| Gene Alias: | C10orf18|FAM208B|bA318E3.2 |
| Gene Description: | transcription activation suppressor family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
