Difference between revisions of "TSS:Hg 103832.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=40828 | |distance_to_tss=40828 | ||
|end=10754088 | |end=10754088 | ||
| Line 9: | Line 9: | ||
|gc_percent=0.283582 | |gc_percent=0.283582 | ||
|gene_alias=SFTPF | |gene_alias=SFTPF | ||
| − | |gene_description= | + | |gene_description=surfactant associated 1, pseudogene |
|gene_name=SFTA1P | |gene_name=SFTA1P | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| Line 21: | Line 21: | ||
|start_of_center_position=10754086 | |start_of_center_position=10754086 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=7(GACTAGAAAAGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:36, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10754086 |
|---|---|
| End of the center position in the TSS region: | 10754087 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 40828 |
|---|---|
| Nearest PromoterID: | NR_027082 |
| Entrez ID: | 207107 |
| Nearest Unigene: | Hs.31562 |
| Nearest Refseq: | NR_027082 |
| Nearest Ensembl: | ENSG00000225383 |
| Gene Name: | SFTA1P |
| Gene Alias: | SFTPF |
| Gene Description: | surfactant associated 1, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0 |
| GC%: | 0.283582 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 7(GACTAGAAAAGC,-,0.00) |
