Difference between revisions of "TSS:Hg 103899.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000420401.5 | + | |all_trans=ENST00000420401.5:-8 AK024562:-10 BC009617:-19 AK290902:-25 AK222511:-36 AF289604:-53 AF275677:-70 ENST00000379215.9:-72 NM_024693:-72 ENST00000496136.5:-88 HM005699:-97 KJ899561:113 BC001091:163 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=-8 | |distance=-8 | ||
| − | |distance_to_tss= | + | |distance_to_tss=77 |
|end=11742464 | |end=11742464 | ||
|end_of_center_position=11742459 | |end_of_center_position=11742459 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_024693 | |nearest_refseq=NM_024693 | ||
|nearest_unigene=Hs.22242 | |nearest_unigene=Hs.22242 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=11742453 | |start=11742453 | ||
|start_of_center_position=11742458 | |start_of_center_position=11742458 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000420401.5 | + | |transcript_name=ENST00000420401.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103899.1 | |tss_id=hg_103899.1 | ||
Revision as of 17:37, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11742458 |
|---|---|
| End of the center position in the TSS region: | 11742459 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000420401.5 |
|---|---|
| Distance: | -8 |
| Num_trans: | 13 |
| All_trans: | ENST00000420401.5:-8 AK024562:-10 BC009617:-19 AK290902:-25 AK222511:-36 AF289604:-53 AF275677:-70 ENST00000379215.9:-72 NM_024693:-72 ENST00000496136.5:-88 HM005699:-97 KJ899561:113 BC001091:163 |
TATA-Box annotation
| Distance to TSS: | 77 |
|---|---|
| Nearest PromoterID: | NM_024693 |
| Entrez ID: | 79746 |
| Nearest Unigene: | Hs.22242 |
| Nearest Refseq: | NM_024693 |
| Nearest Ensembl: | ENSG00000134463 |
| Gene Name: | enoyl-CoA hydratase domain containing 3 |
| Gene Alias: | - |
| Gene Description: | enoyl-CoA hydratase domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
