Difference between revisions of "TSS:Hg 103901.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000420401.5 | + | |all_trans=ENST00000420401.5:-43 AK024562:-45 BC009617:-54 AK290902:-60 AK222511:-71 KJ899561:80 AF289604:-88 AF275677:-105 ENST00000379215.9:-107 NM_024693:-107 ENST00000496136.5:-123 BC001091:130 HM005699:-132 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=-43 | |distance=-43 | ||
| − | |distance_to_tss= | + | |distance_to_tss=111 |
|end=11742497 | |end=11742497 | ||
|end_of_center_position=11742493 | |end_of_center_position=11742493 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_024693 | |nearest_refseq=NM_024693 | ||
|nearest_unigene=Hs.22242 | |nearest_unigene=Hs.22242 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=11742488 | |start=11742488 | ||
|start_of_center_position=11742492 | |start_of_center_position=11742492 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000420401.5 | + | |transcript_name=ENST00000420401.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103901.1 | |tss_id=hg_103901.1 | ||
Revision as of 17:37, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11742492 |
|---|---|
| End of the center position in the TSS region: | 11742493 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000420401.5 |
|---|---|
| Distance: | -43 |
| Num_trans: | 13 |
| All_trans: | ENST00000420401.5:-43 AK024562:-45 BC009617:-54 AK290902:-60 AK222511:-71 KJ899561:80 AF289604:-88 AF275677:-105 ENST00000379215.9:-107 NM_024693:-107 ENST00000496136.5:-123 BC001091:130 HM005699:-132 |
TATA-Box annotation
| Distance to TSS: | 111 |
|---|---|
| Nearest PromoterID: | NM_024693 |
| Entrez ID: | 79746 |
| Nearest Unigene: | Hs.22242 |
| Nearest Refseq: | NM_024693 |
| Nearest Ensembl: | ENSG00000134463 |
| Gene Name: | enoyl-CoA hydratase domain containing 3 |
| Gene Alias: | - |
| Gene Description: | enoyl-CoA hydratase domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
