Difference between revisions of "TSS:Hg 103907.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|CMT2Q= | |CMT2Q= | ||
| − | |all_trans= | + | |all_trans=ENST00000437298.1:0 BC002477:0 BC007955:0 AB046850:0 AK309810:0 CU675875:0 KJ899148:0 ENST00000263035.9:-11 NM_018706:-11 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=46 |
|end=12069035 | |end=12069035 | ||
|end_of_center_position=12069000 | |end_of_center_position=12069000 | ||
|entrez_id=55526 | |entrez_id=55526 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=AMOXAD | + | |gene_alias=AMOXAD{{!}}CMT2Q |
|gene_description=dehydrogenase E1 and transketolase domain containing 1 | |gene_description=dehydrogenase E1 and transketolase domain containing 1 | ||
|gene_id=55526 | |gene_id=55526 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_018706 | |nearest_refseq=NM_018706 | ||
|nearest_unigene=Hs.104980 | |nearest_unigene=Hs.104980 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=12068964 | |start=12068964 | ||
|start_of_center_position=12068999 | |start_of_center_position=12068999 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000437298.1 BC002477 BC007955 AB046850 AK309810 CU675875 KJ899148 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103907.1 | |tss_id=hg_103907.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=C9JWN1 | + | |uniprot_id=C9JWN1 |
}} | }} | ||
Revision as of 17:37, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12068999 |
|---|---|
| End of the center position in the TSS region: | 12069000 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000437298.1 BC002477 BC007955 AB046850 AK309810 CU675875 KJ899148 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000437298.1:0 BC002477:0 BC007955:0 AB046850:0 AK309810:0 CU675875:0 KJ899148:0 ENST00000263035.9:-11 NM_018706:-11 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NM_018706 |
| Entrez ID: | 55526 |
| Nearest Unigene: | Hs.104980 |
| Nearest Refseq: | NM_018706 |
| Nearest Ensembl: | ENSG00000181192 |
| Gene Name: | dehydrogenase E1 and transketolase domain containing 1 |
| Gene Alias: | AMOXAD|CMT2Q |
| Gene Description: | dehydrogenase E1 and transketolase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
