Difference between revisions of "TSS:Hg 103916.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CaM-K1= | |CaM-K1= | ||
|CaMKID= | |CaMKID= | ||
| − | |all_trans=ENST00000619168 | + | |all_trans=AK289393:276 ENST00000619168.5:281 NM_020397:281 NM_153498:281 AB081726:321 ENST00000487696.1:386 KY966262:406 BC035745:460 ENST00000378845.5:467 AF286366:467 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=276 |
| − | |distance_to_tss=- | + | |distance_to_tss=-297 |
|end=12349266 | |end=12349266 | ||
|end_of_center_position=12349251 | |end_of_center_position=12349251 | ||
|entrez_id=57118 | |entrez_id=57118 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=CKLiK | + | |gene_alias=CKLiK{{!}}CaM-K1{{!}}CaMKID |
|gene_description=calcium/calmodulin dependent protein kinase ID | |gene_description=calcium/calmodulin dependent protein kinase ID | ||
|gene_id=57118 | |gene_id=57118 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_020397 | |nearest_refseq=NM_020397 | ||
|nearest_unigene=Hs.600547 | |nearest_unigene=Hs.600547 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=12349234 | |start=12349234 | ||
|start_of_center_position=12349250 | |start_of_center_position=12349250 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK289393 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103916.1 | |tss_id=hg_103916.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12349250 |
|---|---|
| End of the center position in the TSS region: | 12349251 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK289393 |
|---|---|
| Distance: | 276 |
| Num_trans: | 10 |
| All_trans: | AK289393:276 ENST00000619168.5:281 NM_020397:281 NM_153498:281 AB081726:321 ENST00000487696.1:386 KY966262:406 BC035745:460 ENST00000378845.5:467 AF286366:467 |
TATA-Box annotation
| Distance to TSS: | -297 |
|---|---|
| Nearest PromoterID: | NM_020397 |
| Entrez ID: | 57118 |
| Nearest Unigene: | Hs.600547 |
| Nearest Refseq: | NM_020397 |
| Nearest Ensembl: | ENSG00000183049 |
| Gene Name: | calcium/calmodulin dependent protein kinase ID |
| Gene Alias: | CKLiK|CaM-K1|CaMKID |
| Gene Description: | calcium/calmodulin dependent protein kinase ID |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
