Difference between revisions of "TSS:Hg 103920.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CaM-K1= | |CaM-K1= | ||
|CaMKID= | |CaMKID= | ||
| − | |all_trans=ENST00000378845.5 | + | |all_trans=ENST00000378845.5:0 BC035745:0 AF286366:0 KY966262:-15 ENST00000487696.1:-35 CU690184:81 AB528894:81 KJ899309:81 KJ905511:81 DQ892464:82 DQ895676:82 AB081726:-100 ENST00000619168.5:-140 NM_020397:-140 NM_153498:-140 AK289393:-145 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=164 |
|end=12349735 | |end=12349735 | ||
|end_of_center_position=12349711 | |end_of_center_position=12349711 | ||
|entrez_id=57118 | |entrez_id=57118 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=CKLiK | + | |gene_alias=CKLiK{{!}}CaM-K1{{!}}CaMKID |
|gene_description=calcium/calmodulin dependent protein kinase ID | |gene_description=calcium/calmodulin dependent protein kinase ID | ||
|gene_id=57118 | |gene_id=57118 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_020397 | |nearest_refseq=NM_020397 | ||
|nearest_unigene=Hs.600547 | |nearest_unigene=Hs.600547 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=12349686 | |start=12349686 | ||
|start_of_center_position=12349710 | |start_of_center_position=12349710 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000378845.5 | + | |transcript_name=ENST00000378845.5 BC035745 AF286366 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103920.1 | |tss_id=hg_103920.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5SQQ7 | + | |uniprot_id=Q5SQQ7 |
}} | }} | ||
Revision as of 17:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12349710 |
|---|---|
| End of the center position in the TSS region: | 12349711 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000378845.5 BC035745 AF286366 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000378845.5:0 BC035745:0 AF286366:0 KY966262:-15 ENST00000487696.1:-35 CU690184:81 AB528894:81 KJ899309:81 KJ905511:81 DQ892464:82 DQ895676:82 AB081726:-100 ENST00000619168.5:-140 NM_020397:-140 NM_153498:-140 AK289393:-145 |
TATA-Box annotation
| Distance to TSS: | 164 |
|---|---|
| Nearest PromoterID: | NM_153498 |
| Entrez ID: | 57118 |
| Nearest Unigene: | Hs.600547 |
| Nearest Refseq: | NM_020397 |
| Nearest Ensembl: | ENSG00000183049 |
| Gene Name: | calcium/calmodulin dependent protein kinase ID |
| Gene Alias: | CKLiK|CaM-K1|CaMKID |
| Gene Description: | calcium/calmodulin dependent protein kinase ID |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
