Difference between revisions of "TSS:Hg 104076.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC031031:229 | + | |all_trans=BC031031:229 LF346187:-441 MA581764:-441 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_108060 | |nearest_refseq=NR_108060 | ||
|nearest_unigene=Hs.740502 | |nearest_unigene=Hs.740502 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=17236285 | |start=17236285 | ||
|start_of_center_position=17236321 | |start_of_center_position=17236321 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=66(TCTTTTAAGGAA,+,0.00) |
|transcript_name=BC031031 | |transcript_name=BC031031 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 17:42, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17236321 |
|---|---|
| End of the center position in the TSS region: | 17236322 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC031031 |
|---|---|
| Distance: | 229 |
| Num_trans: | 3 |
| All_trans: | BC031031:229 LF346187:-441 MA581764:-441 |
TATA-Box annotation
| Distance to TSS: | -6336 |
|---|---|
| Nearest PromoterID: | NR_108061 |
| Entrez ID: | 100507347 |
| Nearest Unigene: | Hs.740502 |
| Nearest Refseq: | NR_108060 |
| Nearest Ensembl: | ENSG00000229124 |
| Gene Name: | vimentin |
| Gene Alias: | - |
| Gene Description: | VIM antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 66(TCTTTTAAGGAA,+,0.00) |
