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Difference between revisions of "TSS:Hg 10410.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC016048:0 NM_001010847:-66 ENST00000376085.3:-367 uc001avb.4:-367
+
|all_trans=BC016048:0 ENST00000376085.4:-322 NM_001010847:-322 LP895739:-367
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.17
 
|cpg_percent=0.17
 
|distance=0
 
|distance=0
|distance_to_tss=75
+
|distance_to_tss=331
 
|end=13513681
 
|end=13513681
 
|end_of_center_position=13513672
 
|end_of_center_position=13513672

Revision as of 17:42, 15 June 2021

Basic information about the TSS


TSS ID:hg_10410.1
Species:human
Chr:chr1
TSS Classification:yes
Start:13513662
End:13513681
Strand:-
TSS Score:1
Start of the center position in the TSS region:13513671
End of the center position in the TSS region:13513672



Gene and protein annotation


Transcript_name:BC016048
Distance:0
GeneID:126755
HGNC/MGI_ID:HGNC:27005
UniProt_ID:
Gene_name:leucine rich repeat containing 38
Gene_symbol:LRRC38
Gene_synonyms:
Gene_source:HGNC:27005



Transcript annotation


Transcript_name:BC016048
Distance:0
Num_trans:4
All_trans:BC016048:0 ENST00000376085.4:-322 NM_001010847:-322 LP895739:-367



TATA-Box annotation


Distance to TSS:331
Nearest PromoterID:NM_001010847
Entrez ID:126755
Nearest Unigene:Hs.657356
Nearest Refseq:NM_001010847
Nearest Ensembl:ENSG00000162494
Gene Name:leucine rich repeat containing 38
Gene Alias:-
Gene Description:leucine rich repeat containing 38
Gene Type:protein-coding
CpG%:0.17
GC%:0.835821
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):