Difference between revisions of "TSS:Hg 10413.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC016048:119 ENST00000376085.4:-203 NM_001010847:-203 LP895739:-248 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=119 |
| − | |distance_to_tss= | + | |distance_to_tss=212 |
|end=13513800 | |end=13513800 | ||
|end_of_center_position=13513791 | |end_of_center_position=13513791 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=13513790 | |start_of_center_position=13513790 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC016048 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10413.1 | |tss_id=hg_10413.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:43, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13513790 |
|---|---|
| End of the center position in the TSS region: | 13513791 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC016048 |
|---|---|
| Distance: | 119 |
| Num_trans: | 4 |
| All_trans: | BC016048:119 ENST00000376085.4:-203 NM_001010847:-203 LP895739:-248 |
TATA-Box annotation
| Distance to TSS: | 212 |
|---|---|
| Nearest PromoterID: | NM_001010847 |
| Entrez ID: | 126755 |
| Nearest Unigene: | Hs.657356 |
| Nearest Refseq: | NM_001010847 |
| Nearest Ensembl: | ENSG00000162494 |
| Gene Name: | leucine rich repeat containing 38 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat containing 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
