Difference between revisions of "TSS:Hg 104215.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000651298.1:0 ENST00000471315.5:0 AB209755:0 BC052798:4 ENST00000652497.1:6 BC094844:7 BC129946:9 ENST00000650772.1:-13 ENST00000495130.5:20 ENST00000377091.7:-108 BC065376:-110 BC080577:-110 U13948:-115 ENST00000621220.4:175 ENST00000377059.7:175 CU687346:175 KJ892460:175 BC156206:175 BC156949:175 AY598745:175 LF383675:175 MA619252:175 ENST00000377100.8:-221 ENST00000377072.8:-221 ENST00000307729.12:-221 NM_001195626:-221 ENST00000476557.5:232 ENST00000480415.6:279 ENST00000462999.5:279 ENST00000430455.2:279 ENST00000479634.1:279 AF060927:279 AF060934:279 AF060935:279 AF060936:279 AF060937:279 AF060938:279 NM_004641:-281 NM_001195630:-281 NM_001195628:-281 NM_001195627:-281 NR_136736:-281 BC032532:-288 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=289 |
|end=21534470 | |end=21534470 | ||
|end_of_center_position=21534462 | |end_of_center_position=21534462 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
| − | |gene_description= | + | |gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_id=8028 | |gene_id=8028 | ||
| − | |gene_name= | + | |gene_name=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_source=HGNC:16063 | |gene_source=HGNC:16063 | ||
|gene_symbol=MLLT10 | |gene_symbol=MLLT10 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:16063 | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195627 |
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| − | |num_trans= | + | |num_trans=43 |
|species=human | |species=human | ||
|start=21534452 | |start=21534452 | ||
|start_of_center_position=21534461 | |start_of_center_position=21534461 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000471315.5 | + | |transcript_name=ENST00000651298.1 ENST00000471315.5 AB209755 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104215.1 | |tss_id=hg_104215.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q59EQ6 | + | |uniprot_id=A0A494C1P9 Q59EQ6 |
}} | }} | ||
Revision as of 17:45, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21534461 |
|---|---|
| End of the center position in the TSS region: | 21534462 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000651298.1 ENST00000471315.5 AB209755 |
|---|---|
| Distance: | 0 |
| Num_trans: | 43 |
| All_trans: | ENST00000651298.1:0 ENST00000471315.5:0 AB209755:0 BC052798:4 ENST00000652497.1:6 BC094844:7 BC129946:9 ENST00000650772.1:-13 ENST00000495130.5:20 ENST00000377091.7:-108 BC065376:-110 BC080577:-110 U13948:-115 ENST00000621220.4:175 ENST00000377059.7:175 CU687346:175 KJ892460:175 BC156206:175 BC156949:175 AY598745:175 LF383675:175 MA619252:175 ENST00000377100.8:-221 ENST00000377072.8:-221 ENST00000307729.12:-221 NM_001195626:-221 ENST00000476557.5:232 ENST00000480415.6:279 ENST00000462999.5:279 ENST00000430455.2:279 ENST00000479634.1:279 AF060927:279 AF060934:279 AF060935:279 AF060936:279 AF060937:279 AF060938:279 NM_004641:-281 NM_001195630:-281 NM_001195628:-281 NM_001195627:-281 NR_136736:-281 BC032532:-288 |
TATA-Box annotation
| Distance to TSS: | 289 |
|---|---|
| Nearest PromoterID: | NM_001195627 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Alias: | AF10 |
| Gene Description: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
