Difference between revisions of "TSS:Hg 104385.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000642197.1:0 ENST00000642920.2:0 NM_001368265:0 NM_017433:0 AK310494:0 AF229172:21 GQ891517:21 AY101367:21 ENST00000376302.5:28 BC036079:28 BC045538:30 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-2 |
|end=25934246 | |end=25934246 | ||
|end_of_center_position=25934228 | |end_of_center_position=25934228 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:7601 | |hgnc_mgi_id=HGNC:7601 | ||
|nearest_ensembl=ENSG00000095777 | |nearest_ensembl=ENSG00000095777 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368265 |
|nearest_refseq=NM_017433 | |nearest_refseq=NM_017433 | ||
|nearest_unigene=Hs.662630 | |nearest_unigene=Hs.662630 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=25934208 | |start=25934208 | ||
|start_of_center_position=25934227 | |start_of_center_position=25934227 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK310494 | + | |transcript_name=ENST00000642197.1 ENST00000642920.2 NM_001368265 NM_017433 AK310494 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104385.1 | |tss_id=hg_104385.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8NEV4 |
}} | }} | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 25934227 |
|---|---|
| End of the center position in the TSS region: | 25934228 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000642197.1 ENST00000642920.2 NM_001368265 NM_017433 AK310494 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000642197.1:0 ENST00000642920.2:0 NM_001368265:0 NM_017433:0 AK310494:0 AF229172:21 GQ891517:21 AY101367:21 ENST00000376302.5:28 BC036079:28 BC045538:30 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001368265 |
| Entrez ID: | 53904 |
| Nearest Unigene: | Hs.662630 |
| Nearest Refseq: | NM_017433 |
| Nearest Ensembl: | ENSG00000095777 |
| Gene Name: | myosin IIIA |
| Gene Alias: | DFNB30 |
| Gene Description: | myosin IIIA |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
