Difference between revisions of "TSS:Hg 104406.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RARP1= | |RARP1= | ||
|RIAM= | |RIAM= | ||
| − | |all_trans=ENST00000376236. | + | |all_trans=ENST00000376236.9:132 NM_019043:132 AK308916:149 AK000812:169 ENST00000356785.4:216 BC035636:216 AK303597:-420 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=132 |
| − | |distance_to_tss=- | + | |distance_to_tss=-138 |
|end=26438209 | |end=26438209 | ||
|end_of_center_position=26438203 | |end_of_center_position=26438203 | ||
|entrez_id=54518 | |entrez_id=54518 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=INAG1 | + | |gene_alias=INAG1{{!}}PREL1{{!}}RARP1{{!}}RIAM |
|gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | |gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | ||
|gene_id=54518 | |gene_id=54518 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_019043 | |nearest_refseq=NM_019043 | ||
|nearest_unigene=Hs.310421 | |nearest_unigene=Hs.310421 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=26438196 | |start=26438196 | ||
|start_of_center_position=26438202 | |start_of_center_position=26438202 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000376236. | + | |transcript_name=ENST00000376236.9 NM_019043 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104406.1 | |tss_id=hg_104406.1 | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26438202 |
|---|---|
| End of the center position in the TSS region: | 26438203 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376236.9 NM_019043 |
|---|---|
| Distance: | 132 |
| Num_trans: | 7 |
| All_trans: | ENST00000376236.9:132 NM_019043:132 AK308916:149 AK000812:169 ENST00000356785.4:216 BC035636:216 AK303597:-420 |
TATA-Box annotation
| Distance to TSS: | -138 |
|---|---|
| Nearest PromoterID: | NM_019043 |
| Entrez ID: | 54518 |
| Nearest Unigene: | Hs.310421 |
| Nearest Refseq: | NM_019043 |
| Nearest Ensembl: | ENSG00000077420 |
| Gene Name: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Alias: | INAG1|PREL1|RARP1|RIAM |
| Gene Description: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
