Difference between revisions of "TSS:Hg 104433.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TPT= | |TPT= | ||
|TPT 1= | |TPT 1= | ||
| − | |all_trans= | + | |all_trans=NM_001321979:-22 NM_001321978:-22 AK024802:174 AK223414:174 AB210838:181 LF383676:181 MA619253:181 BC063635:211 ENST00000376215.10:216 NM_014317:216 KJ902358:226 BC049211:229 LF346240:298 MA581817:298 AF118395:322 LF346241:500 MA581818:500 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=-22 |
|distance_to_tss=41 | |distance_to_tss=41 | ||
|end=26697485 | |end=26697485 | ||
| Line 15: | Line 15: | ||
|entrez_id=23590 | |entrez_id=23590 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=COQ1 | + | |gene_alias=COQ1{{!}}COQ10D2{{!}}COQ1A{{!}}DPS{{!}}SPS{{!}}TPRT{{!}}TPT{{!}}TPT 1{{!}}hDPS1 |
|gene_description=decaprenyl diphosphate synthase subunit 1 | |gene_description=decaprenyl diphosphate synthase subunit 1 | ||
|gene_id=23590 | |gene_id=23590 | ||
| − | |gene_name= | + | |gene_name=decaprenyl diphosphate synthase subunit 1 |
|gene_source=HGNC:17759 | |gene_source=HGNC:17759 | ||
|gene_symbol=PDSS1 | |gene_symbol=PDSS1 | ||
| − | |gene_synonyms=COQ1 TPT | + | |gene_synonyms=COQ1 COQ1A TPT |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hDPS1= | |hDPS1= | ||
|hgnc_mgi_id=HGNC:17759 | |hgnc_mgi_id=HGNC:17759 | ||
|nearest_ensembl=ENSG00000148459 | |nearest_ensembl=ENSG00000148459 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001321979 |
|nearest_refseq=NM_014317 | |nearest_refseq=NM_014317 | ||
|nearest_unigene=Hs.558468 | |nearest_unigene=Hs.558468 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=26697445 | |start=26697445 | ||
|start_of_center_position=26697465 | |start_of_center_position=26697465 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001321979 NM_001321978 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104433.1 | |tss_id=hg_104433.1 | ||
Revision as of 17:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26697465 |
|---|---|
| End of the center position in the TSS region: | 26697466 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001321979 NM_001321978 |
|---|---|
| Distance: | -22 |
| Num_trans: | 17 |
| All_trans: | NM_001321979:-22 NM_001321978:-22 AK024802:174 AK223414:174 AB210838:181 LF383676:181 MA619253:181 BC063635:211 ENST00000376215.10:216 NM_014317:216 KJ902358:226 BC049211:229 LF346240:298 MA581817:298 AF118395:322 LF346241:500 MA581818:500 |
TATA-Box annotation
| Distance to TSS: | 41 |
|---|---|
| Nearest PromoterID: | NM_001321979 |
| Entrez ID: | 23590 |
| Nearest Unigene: | Hs.558468 |
| Nearest Refseq: | NM_014317 |
| Nearest Ensembl: | ENSG00000148459 |
| Gene Name: | decaprenyl diphosphate synthase subunit 1 |
| Gene Alias: | COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 |
| Gene Description: | decaprenyl diphosphate synthase subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
