Difference between revisions of "TSS:Hg 104620.1"
From referenceTSS
| Line 8: | Line 8: | ||
|ZFHEP= | |ZFHEP= | ||
|ZFHX1A= | |ZFHX1A= | ||
| + | |all_trans=LP925043:233 LP925044:244 LP925045:329 LP925046:338 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=233 |
| − | |distance_to_tss= | + | |distance_to_tss=-127606 |
|end=31527374 | |end=31527374 | ||
|end_of_center_position=31527362 | |end_of_center_position=31527362 | ||
| − | |entrez_id= | + | |entrez_id=100505502 |
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=putative UPF0607 protein FLJ37424 |
| − | |gene_name= | + | |gene_name=LOC100505502 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368169 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001368169 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.730227 |
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=31527348 | |start=31527348 | ||
|start_of_center_position=31527361 | |start_of_center_position=31527361 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LP925043 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104620.1 | |tss_id=hg_104620.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:54, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 31527361 |
|---|---|
| End of the center position in the TSS region: | 31527362 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LP925043 |
|---|---|
| Distance: | 233 |
| Num_trans: | 4 |
| All_trans: | LP925043:233 LP925044:244 LP925045:329 LP925046:338 |
TATA-Box annotation
| Distance to TSS: | -127606 |
|---|---|
| Nearest PromoterID: | NM_001368169 |
| Entrez ID: | 100505502 |
| Nearest Unigene: | Hs.730227 |
| Nearest Refseq: | NM_001368169 |
| Nearest Ensembl: | |
| Gene Name: | LOC100505502 |
| Gene Alias: | - |
| Gene Description: | putative UPF0607 protein FLJ37424 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
