Difference between revisions of "TSS:Hg 104927.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PRKG1B= | |PRKG1B= | ||
|PRKGR1B= | |PRKGR1B= | ||
| − | |all_trans=NM_006258:0 AK313416:0 EF560730:0 BC127090:19 Y07512:19 BC062688:55 AB590766:76 GQ129235:76 GQ129236:76 KJ891891:76 | + | |all_trans=ENST00000373980.11:0 ENST00000643704.1:0 ENST00000643582.1:0 NM_001374782:0 NM_006258:0 AK313416:0 EF560730:0 BC127090:19 Y07512:19 BC062688:55 ENST00000373976.9:56 AB590766:76 GQ129235:76 GQ129236:76 KJ891891:76 ENST00000645324.1:-135 |
|cGK= | |cGK= | ||
|cGK 1= | |cGK 1= | ||
| Line 13: | Line 13: | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-11 |
|end=51074514 | |end=51074514 | ||
|end_of_center_position=51074477 | |end_of_center_position=51074477 | ||
|entrez_id=5592 | |entrez_id=5592 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=AAT8 | + | |gene_alias=AAT8{{!}}PKG{{!}}PKG1{{!}}PRKG1B{{!}}PRKGR1B{{!}}cGK{{!}}cGK 1{{!}}cGK1{{!}}cGKI{{!}}cGKI-BETA{{!}}cGKI-alpha |
| − | |gene_description= | + | |gene_description=protein kinase cGMP-dependent 1 |
|gene_id=5592 | |gene_id=5592 | ||
| − | |gene_name= | + | |gene_name=protein kinase cGMP-dependent 1 |
|gene_source=HGNC:9414 | |gene_source=HGNC:9414 | ||
|gene_symbol=PRKG1 | |gene_symbol=PRKG1 | ||
| − | |gene_synonyms=PGK PKG | + | |gene_synonyms=PGK PKG PKG1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:9414 | |hgnc_mgi_id=HGNC:9414 | ||
| Line 31: | Line 31: | ||
|nearest_refseq=NM_006258 | |nearest_refseq=NM_006258 | ||
|nearest_unigene=Hs.407535 | |nearest_unigene=Hs.407535 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=51074438 | |start=51074438 | ||
|start_of_center_position=51074476 | |start_of_center_position=51074476 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_006258 AK313416 EF560730 | + | |transcript_name=ENST00000373980.11 ENST00000643704.1 ENST00000643582.1 NM_001374782 NM_006258 AK313416 EF560730 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104927.1 | |tss_id=hg_104927.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q13976 | + | |uniprot_id=A0A2R8YE50 A0A2R8YH74 Q13976 |
}} | }} | ||
Revision as of 18:02, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 51074476 |
|---|---|
| End of the center position in the TSS region: | 51074477 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373980.11 ENST00000643704.1 ENST00000643582.1 NM_001374782 NM_006258 AK313416 EF560730 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000373980.11:0 ENST00000643704.1:0 ENST00000643582.1:0 NM_001374782:0 NM_006258:0 AK313416:0 EF560730:0 BC127090:19 Y07512:19 BC062688:55 ENST00000373976.9:56 AB590766:76 GQ129235:76 GQ129236:76 KJ891891:76 ENST00000645324.1:-135 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_006258 |
| Entrez ID: | 5592 |
| Nearest Unigene: | Hs.407535 |
| Nearest Refseq: | NM_006258 |
| Nearest Ensembl: | ENSG00000185532 |
| Gene Name: | protein kinase cGMP-dependent 1 |
| Gene Alias: | AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha |
| Gene Description: | protein kinase cGMP-dependent 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
