Difference between revisions of "TSS:Hg 104979.1"
From referenceTSS
| Line 3: | Line 3: | ||
|SIP30= | |SIP30= | ||
|ZWINT1= | |ZWINT1= | ||
| + | |all_trans=ENST00000655098.1:-34 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=-34 |
|distance_to_tss=-243 | |distance_to_tss=-243 | ||
|end=56361520 | |end=56361520 | ||
| Line 11: | Line 12: | ||
|entrez_id=11130 | |entrez_id=11130 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=HZwint-1 | + | |gene_alias=HZwint-1{{!}}KNTC2AP{{!}}SIP30{{!}}ZWINT1 |
|gene_description=ZW10 interacting kinetochore protein | |gene_description=ZW10 interacting kinetochore protein | ||
|gene_name=ZWINT | |gene_name=ZWINT | ||
| Line 19: | Line 20: | ||
|nearest_refseq=NM_007057 | |nearest_refseq=NM_007057 | ||
|nearest_unigene=Hs.591363 | |nearest_unigene=Hs.591363 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=56361512 | |start=56361512 | ||
|start_of_center_position=56361516 | |start_of_center_position=56361516 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-32(GACTATAAGTGG,-,0.00),51(GCGTTTTAAGGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000655098.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104979.1 | |tss_id=hg_104979.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 56361516 |
|---|---|
| End of the center position in the TSS region: | 56361517 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000655098.1 |
|---|---|
| Distance: | -34 |
| Num_trans: | 1 |
| All_trans: | ENST00000655098.1:-34 |
TATA-Box annotation
| Distance to TSS: | -243 |
|---|---|
| Nearest PromoterID: | NM_032997 |
| Entrez ID: | 11130 |
| Nearest Unigene: | Hs.591363 |
| Nearest Refseq: | NM_007057 |
| Nearest Ensembl: | ENSG00000122952 |
| Gene Name: | ZWINT |
| Gene Alias: | HZwint-1|KNTC2AP|SIP30|ZWINT1 |
| Gene Description: | ZW10 interacting kinetochore protein |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GACTATAAGTGG,-,0.00),51(GCGTTTTAAGGG,-,0.00) |
