Difference between revisions of "TSS:Hg 105340.1"
From referenceTSS
| Line 7: | Line 7: | ||
|HMSNR= | |HMSNR= | ||
|HXK1= | |HXK1= | ||
| − | |all_trans= | + | |all_trans=ENST00000450646.6:0 ENST00000480047.5:0 ENST00000360289.6:0 ENST00000448642.6:0 ENST00000479594.5:0 ENST00000464803.6:0 ENST00000483077.5:0 NM_033500:0 NM_033497:0 NM_001322365:0 NM_001322364:0 NM_033498:0 U38226:0 U38227:0 U38228:0 AK128226:0 ENST00000476368.6:13 ENST00000436817.6:-14 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 16: | Line 16: | ||
|entrez_id=3098 | |entrez_id=3098 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=HK | + | |gene_alias=HK{{!}}HK1-ta{{!}}HK1-tb{{!}}HK1-tc{{!}}HKD{{!}}HKI{{!}}HMSNR{{!}}HXK1{{!}}RP79{{!}}hexokinase |
|gene_description=hexokinase 1 | |gene_description=hexokinase 1 | ||
|gene_id=3098 | |gene_id=3098 | ||
| Line 27: | Line 27: | ||
|hgnc_mgi_id=HGNC:4922 | |hgnc_mgi_id=HGNC:4922 | ||
|nearest_ensembl=ENSG00000156515 | |nearest_ensembl=ENSG00000156515 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_033500 |
|nearest_refseq=NM_000188 | |nearest_refseq=NM_000188 | ||
|nearest_unigene=Hs.370365 | |nearest_unigene=Hs.370365 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=69269997 | |start=69269997 | ||
|start_of_center_position=69270005 | |start_of_center_position=69270005 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000450646.6 ENST00000480047.5 ENST00000360289.6 ENST00000448642.6 ENST00000479594.5 ENST00000464803.6 ENST00000483077.5 NM_033500 NM_033497 NM_001322365 NM_001322364 NM_033498 U38226 U38227 U38228 AK128226 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105340.1 | |tss_id=hg_105340.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024QZK7 B3KXY9 P19367 P78542 Q99609 | + | |uniprot_id=A0A024QZK7 A0A2R8Y7T9 B3KXY9 P19367 P78542 Q99609 |
}} | }} | ||
Revision as of 18:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69270005 |
|---|---|
| End of the center position in the TSS region: | 69270006 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000450646.6 ENST00000480047.5 ENST00000360289.6 ENST00000448642.6 ENST00000479594.5 ENST00000464803.6 ENST00000483077.5 NM_033500 NM_033497 NM_001322365 NM_001322364 NM_033498 U38226 U38227 U38228 AK128226 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000450646.6:0 ENST00000480047.5:0 ENST00000360289.6:0 ENST00000448642.6:0 ENST00000479594.5:0 ENST00000464803.6:0 ENST00000483077.5:0 NM_033500:0 NM_033497:0 NM_001322365:0 NM_001322364:0 NM_033498:0 U38226:0 U38227:0 U38228:0 AK128226:0 ENST00000476368.6:13 ENST00000436817.6:-14 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_033500 |
| Entrez ID: | 3098 |
| Nearest Unigene: | Hs.370365 |
| Nearest Refseq: | NM_000188 |
| Nearest Ensembl: | ENSG00000156515 |
| Gene Name: | hexokinase 1 |
| Gene Alias: | HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase |
| Gene Description: | hexokinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
